STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC92442.1Hypothetical protein. (69 aa)    
Predicted Functional Partners:
SFC92456.1
Protease FtsH subunit HflC; HflC and HflK could regulate a protease.
     
 0.865
SFC92485.1
Protease FtsH subunit HflK; HflC and HflK could encode or regulate a protease.
     
 0.865
SFC92502.1
NADPH-glutathione reductase; Maintains high levels of reduced glutathione.
       0.752
SFC81267.1
Hypothetical protein.
  
     0.663
SFC67274.1
Acetyltransferase (GNAT) family protein.
  
     0.633
SFC80936.1
Holin of 3TMs, for gene-transfer release.
  
     0.601
SFC96437.1
Hypothetical protein.
  
     0.525
SFC61543.1
Hypothetical protein.
  
     0.508
SFC92422.1
Serine protease Do; Belongs to the peptidase S1C family.
       0.507
SFC39067.1
Hypothetical protein.
  
     0.484
Your Current Organism:
Pseudooceanicola nitratireducens
NCBI taxonomy Id: 517719
Other names: CGMCC 1.7292, DSM 29619, LMG 24663, LMG:24663, Oceanicola nitratireducens, Oceanicola nitratireducens Zheng et al. 2010, Oceanicola sp. JLT1210, P. nitratireducens, Pseudooceanicola nitratireducens (Zheng et al. 2010) Lai et al. 2015, strain JLT1210
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.