STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD19150.1Enoyl-CoA hydratase/isomerase. (232 aa)    
Predicted Functional Partners:
SFC17049.1
PAS domain S-box-containing protein.
    
 0.956
SFC70324.1
PAS domain S-box-containing protein.
    
 0.943
SFC54204.1
Signal transduction histidine kinase.
    
  0.901
SFD00624.1
Hypothetical protein.
    
  0.901
SFD03635.1
Response regulator receiver domain-containing protein.
    
  0.901
SFD16257.1
Acetyl-CoA acetyltransferase.
  
  0.739
SFD01545.1
Acetyl-CoA acetyltransferase.
  
  0.719
SFD21121.1
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.712
SFC75117.1
acetyl-CoA C-acetyltransferase.
  
  0.707
SFC23880.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
   
  0.644
Your Current Organism:
Pseudooceanicola nitratireducens
NCBI taxonomy Id: 517719
Other names: CGMCC 1.7292, DSM 29619, LMG 24663, LMG:24663, Oceanicola nitratireducens, Oceanicola nitratireducens Zheng et al. 2010, Oceanicola sp. JLT1210, P. nitratireducens, Pseudooceanicola nitratireducens (Zheng et al. 2010) Lai et al. 2015, strain JLT1210
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