STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000186705_00783Unannotated protein. (432 aa)    
Predicted Functional Partners:
GCA_000186705_01165
Unannotated protein.
 0.998
GCA_000186705_00086
Unannotated protein.
 0.986
GCA_000186705_00315
Unannotated protein.
  
 0.964
GCA_000186705_01052
Unannotated protein.
 
      0.826
GCA_000186705_01884
Unannotated protein.
  
 0.826
GCA_000186705_00203
Unannotated protein.
 
    
 0.777
GCA_000186705_01384
Unannotated protein.
 
      0.759
GCA_000186705_00292
Unannotated protein.
 
  
 0.756
GCA_000186705_00515
Unannotated protein.
 
      0.750
GCA_000186705_02412
Unannotated protein.
 
      0.735
Your Current Organism:
Citromicrobium sp. JLT1363
NCBI taxonomy Id: 517722
Other names: C. sp. JLT1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.