STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC91282.1KEGG: cac:CAC2328 7.0e-60 polysaccharide ABC transporter, ATPase component K01990; Psort location: CytoplasmicMembrane, score: 9.49. (376 aa)    
Predicted Functional Partners:
rfbA-2
O-antigen export system permease protein RfbA; Psort location: CytoplasmicMembrane, score: 10.00.
 0.999
EEC89507.1
ABC-2 type transporter; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.995
EEC91279.1
Glycosyltransferase, group 2 family protein; KEGG: gbe:GbCGDNIH1_2152 4.6e-88 glycosyltransferase K00754.
 
  
 0.945
EEC91277.1
KEGG: ldb:Ldb0450 4.7e-29 tarB; putative CDP-glycerol:glycerophosphate glycerophosphotransferase K01005.
  
 
 0.862
EEC89508.1
ABC transporter, ATP-binding protein; KEGG: baa:BA_0359 5.6e-67 ABC transporter K01990; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 
0.817
EEC91280.1
Glycosyltransferase, group 2 family protein; KEGG: aci:ACIAD0074 7.4e-33 putative glycosyl transferase family 2; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.765
EEC91288.1
Glycosyltransferase, group 1 family protein; KEGG: azo:azo3270 5.1e-14 glycosyltransferase; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.717
EEC91284.1
Glycosyltransferase, group 2 family protein; KEGG: afu:AF0322 2.1e-11 rfbQ; rhamnosyl transferase K00754.
 
  
 0.694
EEC91283.1
Glycosyltransferase, group 2 family protein; KEGG: aci:ACIAD0074 2.2e-31 putative glycosyl transferase family 2; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.683
gmhB
D,D-heptose 1,7-bisphosphate phosphatase; KEGG: cac:CAC3056 4.3e-37 nucleoside-diphosphate-sugar pyrophosphorylase K00966; Psort location: Cytoplasmic, score: 8.87.
     
 0.627
Your Current Organism:
Holdemanella biformis
NCBI taxonomy Id: 518637
Other names: Eubacterium biforme DSM 3989, H. biformis DSM 3989, Holdemanella biformis DSM 3989
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.