STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC91258.1KEGG: lwe:lwe2649 3.6e-17 Cof-like hydrolase K01564; Psort location: Cytoplasmic, score: 8.87. (277 aa)    
Predicted Functional Partners:
EEC89293.1
Cof-like hydrolase; KEGG: btl:BALH_4896 4.7e-31 hydrolase, haloacid dehalogenase-like family K01564; Psort location: Cytoplasmic, score: 8.87.
 
 
  0.860
EEC91357.1
Cof-like hydrolase; KEGG: btk:BT9727_5077 6.1e-22 hydrolase, haloacid dehalogenase-like family; Psort location: Cytoplasmic, score: 8.87.
 
 
  0.859
EEC89617.1
HAD hydrolase, family IIB; KEGG: eci:UTI89_C4247 1.1e-09 yidA; hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
 
  0.832
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
 0.822
EEC89391.1
Cof-like hydrolase; KEGG: btl:BALH_4896 4.9e-20 hydrolase, haloacid dehalogenase-like family K01564; Psort location: Cytoplasmic, score: 8.87.
  
     0.770
EEC90919.1
HAD hydrolase, family IIB; KEGG: lwe:lwe2649 1.4e-20 Cof-like hydrolase K01564; Psort location: Cytoplasmic, score: 8.87.
  
     0.768
EEC90539.1
HAD hydrolase, family IIB; KEGG: btk:BT9727_5077 4.1e-13 hydrolase, haloacid dehalogenase-like family; Psort location: Cytoplasmic, score: 8.87.
  
     0.768
EEC89036.1
HAD hydrolase, family IIB; KEGG: lwe:lwe2649 2.3e-13 Cof-like hydrolase K01564; Psort location: Cytoplasmic, score: 8.87.
  
     0.753
EEC89740.1
Cof-like hydrolase; KEGG: eci:UTI89_C4247 1.1e-22 yidA; hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
 
 
0.584
EEC91256.1
Creatinase; KEGG: fnu:FN0453 3.3e-140 Xaa-Pro aminopeptidase K01262; Psort location: Cytoplasmic, score: 8.87.
 
     0.583
Your Current Organism:
Holdemanella biformis
NCBI taxonomy Id: 518637
Other names: Eubacterium biforme DSM 3989, H. biformis DSM 3989, Holdemanella biformis DSM 3989
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.