STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC91019.1PTS system fructose IIA component; KEGG: spr:spr1970 1.0e-12 PTS-EII; phosphotransferase system sugar-specific EIIA component K02793. (137 aa)    
Predicted Functional Partners:
EEC91017.1
KEGG: lsl:LSL_1715 4.8e-29 PTS system, mannose-specific IIC component K00890; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.964
EEC91018.1
KEGG: fnu:FN0631 1.1e-40 PTS system, IIB component K02794; Psort location: Cytoplasmic, score: 9.65.
 
 
 0.949
EEC91016.1
PTS system, mannose/fructose/sorbose family, IID component; KEGG: hso:HS_0607 5.4e-53 manZ; protein-N(pi)-phosphohistidine-sugar phosphotransferase (mannose-specific phosphotransferase system IID component) K02796; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.943
EEC89078.1
KEGG: lsl:LSL_1950 2.4e-20 PTS system, mannose-specific IIC component K00890; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.880
EEC91010.1
KEGG: eci:UTI89_C3570 6.3e-27 agaC; PTS system, N-acetylgalactosamine-specific IIC component 1 K02746; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.857
EEC91009.1
PTS system mannose/fructose/sorbose family IID component; KEGG: eci:UTI89_C2017 5.3e-39 manZ; PTS enzyme IID, mannose-specific K02796; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.837
EEC91020.1
Sigma-54 interaction domain protein; KEGG: eci:UTI89_C1573 3.6e-20 pspF; psp operon transcriptional activator K03974; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.831
EEC89077.1
KEGG: ecp:ECP_1762 2.1e-42 PTS system, mannose-specific IID component K02796; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.828
EEC89733.1
KEGG: lsl:LSL_1950 3.4e-51 PTS system, mannose-specific IIC component K00890; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.815
EEC89079.1
KEGG: cac:CAC1458 2.6e-53 PTS system, fructose(mannose)-specific IIB K00890.
 
 
 0.810
Your Current Organism:
Holdemanella biformis
NCBI taxonomy Id: 518637
Other names: Eubacterium biforme DSM 3989, H. biformis DSM 3989, Holdemanella biformis DSM 3989
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.