STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccpACatabolite control protein A; KEGG: efa:EF1922 1.8e-07 transcriptional regulator, LacI family/carbohydrate kinase, PfkB family protein K00852; Psort location: Cytoplasmic, score: 9.98. (335 aa)    
Predicted Functional Partners:
EEC90055.1
Class II glutamine amidotransferase; KEGG: gka:GK1431 0. glutamate synthaselarge subunit K00265; Psort location: Cytoplasmic, score: 8.87.
    
 
 0.941
ptsH
Phosphocarrier protein HPr; KEGG: btl:BALH_3665 1.7e-17 ptsH; phosphocarrier protein HPr K00889; Psort location: Cytoplasmic, score: 10.00.
   
 
 0.918
EEC90065.1
Phosphotransferase system, EIIB; KEGG: lpl:lp_3513 3.7e-77 pts30BCA; beta-glucosides PTS, EIIBCA K02755:K02756:K02757; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.916
EEC89042.1
Phosphotransferase system, EIIC; KEGG: bbu:BBB29 1.2e-135 malX; PTS system, maltose and glucose-specific IIBC component K02790:K02791; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.916
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
    
   0.801
ribB
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
   0.801
EEC90281.1
Hypothetical protein; KEGG: aae:aq_316 0.0036 hksP2; histidine kinase sensor protein K07636.
       0.792
EEC90282.1
Hypothetical protein; KEGG: mka:MK1014 0.00023 ntpE; archaeal/vacuolar-type H+-ATPase subunit E K02121; Psort location: Cytoplasmic, score: 8.87.
       0.781
EEC89880.1
KEGG: efa:EF1922 0.0031 transcriptional regulator, LacI family/carbohydrate kinase, PfkB family protein K00852; Psort location: Cytoplasmic, score: 9.98.
  
     0.771
era
Ribosome biogenesis GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
   
 
 0.739
Your Current Organism:
Holdemanella biformis
NCBI taxonomy Id: 518637
Other names: Eubacterium biforme DSM 3989, H. biformis DSM 3989, Holdemanella biformis DSM 3989
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.