STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC90215.1Mur ligase middle domain protein; KEGG: sab:SAB1824c 1.5e-57 probable UDP-N-acetylmuramyl tripeptide synthase K01924. (438 aa)    
Predicted Functional Partners:
EEC90216.1
CobB/CobQ-like protein; KEGG: lsl:LSL_0587 1.9e-34 cobyric acid synthase K01957; Psort location: Cytoplasmic, score: 8.87.
 0.999
murG
Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
  
 0.951
EEC89551.1
FemAB family protein; KEGG: spa:M6_Spy0909 1.8e-54 UDP-N-acetylmuramoylpentapeptide-lysine N(6)-alanyltransferase K00687:K05363; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.857
EEC89494.1
Hypothetical protein; KEGG: spa:M6_Spy0909 2.2e-17 UDP-N-acetylmuramoylpentapeptide-lysine N(6)-alanyltransferase K00687:K05363; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.844
EEC89550.1
FemAB family protein; KEGG: spk:MGAS9429_Spy0501 1.7e-72 murM; UDP-N-acetylmuramoylpentapeptide-lysine N(6)-alanyltransferase K00687:K05363.
 
 
 0.841
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
  
 
 0.809
murD
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
  
 
 0.780
EEC90113.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.757
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
  
 
 0.706
EEC89054.1
Glycosyltransferase, group 4 family; KEGG: ssp:SSP1969 1.0e-74 putative glycosyl transferase K02851; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.706
Your Current Organism:
Holdemanella biformis
NCBI taxonomy Id: 518637
Other names: Eubacterium biforme DSM 3989, H. biformis DSM 3989, Holdemanella biformis DSM 3989
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.