STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC89737.1Hypothetical protein; KEGG: lsa:LSA0291 1.3e-19 kdgK; 2-dehydro-3-deoxygluconokinase K00874. (117 aa)    
Predicted Functional Partners:
EEC89739.1
Hypothetical protein; KEGG: lsa:LSA0291 1.7e-19 kdgK; 2-dehydro-3-deoxygluconokinase K00874.
     0.989
EEC89730.1
KDPG and KHG aldolase; KEGG: cno:NT01CX_1477 7.0e-44 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase, putative K01625; Psort location: Cytoplasmic, score: 9.98.
 
 0.949
EEC89778.1
KDPG and KHG aldolase; KEGG: cno:NT01CX_1477 6.1e-45 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase, putative K01625; Psort location: Cytoplasmic, score: 9.65.
 
 0.943
rpe
KEGG: bba:Bd2756 2.6e-46 probable ribulose-phosphate 3-epimerase K01783; Psort location: Cytoplasmic, score: 8.87.
  
 0.908
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
  
 
 0.864
pgi
KEGG: bca:BCE_5037 3.3e-124 pgi; phosphoglucose isomerase K01810; Psort location: Cytoplasmic, score: 9.98; Belongs to the GPI family.
  
 
 0.839
EEC91230.1
KEGG: lwe:lwe0114 3.8e-203 inosine-5-monophosphate dehydrogenase, putative K00088; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.814
EEC88918.1
Aldehyde dehydrogenase (NAD) family protein; KEGG: cpr:CPR_2296 2.0e-119 aldehyde dehydrogenase K00129; Psort location: Cytoplasmic, score: 9.98.
  
  
 0.810
EEC89738.1
Hypothetical protein; KEGG: lsa:LSA0291 3.8e-06 kdgK; 2-dehydro-3-deoxygluconokinase K00874; Psort location: Cytoplasmic, score: 8.87.
       0.773
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 0.749
Your Current Organism:
Holdemanella biformis
NCBI taxonomy Id: 518637
Other names: Eubacterium biforme DSM 3989, H. biformis DSM 3989, Holdemanella biformis DSM 3989
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