STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC89609.1M42 glutamyl aminopeptidase; KEGG: bcz:BCZK0799 1.6e-62 glucanase; deblocking aminopeptidase K01269; Psort location: Cytoplasmic, score: 8.87. (344 aa)    
Predicted Functional Partners:
EEC89610.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87; Belongs to the UPF0246 family.
       0.565
metN
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
    
   0.461
EEC90063.1
Glycosyl hydrolase, family 1; KEGG: cac:CAC1405 4.3e-163 bglA; beta-glucosidase K01188; Psort location: Cytoplasmic, score: 9.98; Belongs to the glycosyl hydrolase 1 family.
     
 0.440
EEC89841.1
Aminotransferase, class I/II; KEGG: fal:FRAAL6066 1.7e-88 putative transaminase.
  
   0.440
EEC89479.1
Aminotransferase, class I/II; KEGG: btk:BT9727_2650 1.8e-84 aspB; aspartate aminotransferase K00811; Psort location: Cytoplasmic, score: 8.87.
  
   0.440
lacG
6-phospho-beta-galactosidase; KEGG: spg:SpyM3_1653 7.7e-157 lacG; putative 6-phospho-beta-galactosidase K01220; Psort location: Cytoplasmic, score: 9.98.
     
 0.440
EEC89213.1
Aminotransferase, class I/II; KEGG: tte:TTE2440 3.7e-109 avtA4; PLP-dependent aminotransferases K00821; Psort location: Cytoplasmic, score: 8.87.
  
   0.440
EEC88926.1
Putative transaminase; KEGG: sai:Saci_1837 1.9e-43 aspartate aminotransferase K00812; Psort location: Cytoplasmic, score: 8.87.
  
   0.440
Your Current Organism:
Holdemanella biformis
NCBI taxonomy Id: 518637
Other names: Eubacterium biforme DSM 3989, H. biformis DSM 3989, Holdemanella biformis DSM 3989
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.