STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEC89601.1Pyruvate formate lyase; KEGG: spi:MGAS10750_Spy1837 1.9e-167 pflD; formate acetyltransferase K00656; Psort location: Cytoplasmic, score: 9.98. (457 aa)    
Predicted Functional Partners:
EEC89589.1
Glycine radical domain protein; KEGG: sag:SAG0331 6.6e-135 pflD-1; formate acetyltransferase K00656; Psort location: Cytoplasmic, score: 9.98.
 
     0.976
EEC89602.1
KEGG: spd:SPD_0229 3.5e-65 glycyl-radical enzyme activating protein family protein K00539; Psort location: Cytoplasmic, score: 9.98.
  
 0.954
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.87.
    
 0.935
EEC89306.1
Glycyl-radical enzyme activating protein family protein; KEGG: cno:NT01CX_0497 1.6e-60 pflC; pyruvate formate-lyase K00538; Psort location: Cytoplasmic, score: 9.98.
  
 0.916
EEC89462.1
Glycyl-radical enzyme activating protein family protein; KEGG: tko:TK0290 4.6e-56 pyruvate-formate lyase-activating enzyme K04069; Psort location: Cytoplasmic, score: 9.98.
  
 0.913
EEC91360.1
Malic enzyme, NAD binding domain protein; KEGG: tte:TTE2332 9.7e-118 sfcA; malic enzyme K00027; Psort location: Cytoplasmic, score: 8.87.
   
 
 0.828
EEC88918.1
Aldehyde dehydrogenase (NAD) family protein; KEGG: cpr:CPR_2296 2.0e-119 aldehyde dehydrogenase K00129; Psort location: Cytoplasmic, score: 9.98.
  
 
 0.826
pta
KEGG: bat:BAS5238 1.4e-84 phosphate acetyltransferase K00625; Psort location: Cytoplasmic, score: 8.87.
   
 
 0.819
pyk
Pyruvate kinase; KEGG: efa:EF1046 8.0e-123 pyk; pyruvate kinase K00873; Psort location: Cytoplasmic, score: 8.87.
   
 
 0.816
EEC89916.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: pfu:PF1327 1.5e-41 glutamate synthase (NADPH) small chain K00266; Psort location: Cytoplasmic, score: 9.98.
    
 0.816
Your Current Organism:
Holdemanella biformis
NCBI taxonomy Id: 518637
Other names: Eubacterium biforme DSM 3989, H. biformis DSM 3989, Holdemanella biformis DSM 3989
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