Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EEC88996.1Cof-like hydrolase; KEGG: btl:BALH_4896 2.4e-34 hydrolase, haloacid dehalogenase-like family K01564; Psort location: Cytoplasmic, score: 8.87. (286 aa)    
Predicted Functional Partners:
EEC88997.1
KEGG: shn:Shewana3_3300 6.1e-11 chromate transporter, chromate ion transporter (CHR) family K00229; Psort location: CytoplasmicMembrane, score: 9.99.
       0.773
EEC88998.1
KEGG: shn:Shewana3_3300 1.7e-10 chromate transporter, chromate ion transporter (CHR) family K00229; Psort location: CytoplasmicMembrane, score: 9.99.
       0.773
EEC91362.1
Cof-like hydrolase; KEGG: ayw:AYWB_548 7.9e-13 putative hydrolase of the HAD superfamily K01802; Psort location: Cytoplasmic, score: 8.87.
  
     0.758
EEC89066.1
Cof-like hydrolase; KEGG: eci:UTI89_C4247 1.1e-15 yidA; hypothetical protein.
  
     0.752
EEC89042.1
Phosphotransferase system, EIIC; KEGG: bbu:BBB29 1.2e-135 malX; PTS system, maltose and glucose-specific IIBC component K02790:K02791; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.707
EEC91066.1
KEGG: sak:SAK_0393 6.5e-15 Cof-like hydrolase/peptidyl-prolyl cis-trans isomerase domain protein.
  
     0.706
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
 0.706
EEC90065.1
Phosphotransferase system, EIIB; KEGG: lpl:lp_3513 3.7e-77 pts30BCA; beta-glucosides PTS, EIIBCA K02755:K02756:K02757; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.667
feoB-2
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
       0.661
EEC88957.1
Cof-like hydrolase; KEGG: btl:BALH_4896 2.7e-19 hydrolase, haloacid dehalogenase-like family K01564.
 
 
 
0.602
Your Current Organism:
Holdemanella biformis
NCBI taxonomy Id: 518637
Other names: Eubacterium biforme DSM 3989, H. biformis DSM 3989, Holdemanella biformis DSM 3989
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