STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmar_0966KEGG: mlo:mll5255 hypothetical protein. (317 aa)    
Predicted Functional Partners:
Rmar_0967
PFAM: asparagine synthase; KEGG: mlo:mll5256 asparagine synthetase.
 
     0.895
Rmar_0972
KEGG: gur:Gura_1355 hypothetical protein.
 
     0.824
Rmar_1153
KEGG: sfu:Sfum_0087 hypothetical protein.
 
     0.787
Rmar_1587
KEGG: sfu:Sfum_0087 hypothetical protein.
 
     0.771
Rmar_1584
KEGG: ppd:Ppro_0048 hypothetical protein.
  
     0.692
Rmar_0968
Hypothetical protein.
       0.519
Rmar_0971
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sfu:Sfum_0086 ABC transporter related.
 
     0.444
Rmar_0965
KEGG: sat:SYN_02450 hypoxanthine-guanine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
       0.443
Rmar_0969
Hypothetical protein.
       0.417
Your Current Organism:
Rhodothermus marinus
NCBI taxonomy Id: 518766
Other names: R. marinus DSM 4252, Rhodothermus marinus DSM 4252, Rhodothermus marinus str. DSM 4252, Rhodothermus marinus strain DSM 4252
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.