Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KYG26090.1 | KYG26091.1 | AZF04_13475 | AZF04_13480 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. | 0.613 |
KYG26090.1 | KYG28229.1 | AZF04_13475 | AZF04_10035 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.505 |
KYG26090.1 | KYG31791.1 | AZF04_13475 | AZF04_03135 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | LL-diaminopimelate aminotransferase; Produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.561 |
KYG26090.1 | KYG31803.1 | AZF04_13475 | AZF04_03215 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.430 |
KYG26090.1 | KYG32425.1 | AZF04_13475 | AZF04_06610 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Sodium:proton exchanger; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.421 |
KYG26090.1 | KYG33511.1 | AZF04_13475 | AZF04_16240 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Catalyzes the transamination of the aromatic amino acid forming a ketoacid; first step in aromatic amino acid degradation in lactococci; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.501 |
KYG26090.1 | KYG34368.1 | AZF04_13475 | AZF04_14350 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Sodium:proton exchanger; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.495 |
KYG26091.1 | KYG26090.1 | AZF04_13480 | AZF04_13475 | LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.613 |
KYG28229.1 | KYG26090.1 | AZF04_10035 | AZF04_13475 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.505 |
KYG31791.1 | KYG26090.1 | AZF04_03135 | AZF04_13475 | LL-diaminopimelate aminotransferase; Produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.561 |
KYG31791.1 | KYG33511.1 | AZF04_03135 | AZF04_16240 | LL-diaminopimelate aminotransferase; Produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however; Derived by automated computational analysis using gene prediction method: Protein Homology. | Catalyzes the transamination of the aromatic amino acid forming a ketoacid; first step in aromatic amino acid degradation in lactococci; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.579 |
KYG31803.1 | KYG26090.1 | AZF04_03215 | AZF04_13475 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.430 |
KYG32425.1 | KYG26090.1 | AZF04_06610 | AZF04_13475 | Sodium:proton exchanger; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.421 |
KYG33511.1 | KYG26090.1 | AZF04_16240 | AZF04_13475 | Catalyzes the transamination of the aromatic amino acid forming a ketoacid; first step in aromatic amino acid degradation in lactococci; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.501 |
KYG33511.1 | KYG31791.1 | AZF04_16240 | AZF04_03135 | Catalyzes the transamination of the aromatic amino acid forming a ketoacid; first step in aromatic amino acid degradation in lactococci; Derived by automated computational analysis using gene prediction method: Protein Homology. | LL-diaminopimelate aminotransferase; Produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.579 |
KYG34368.1 | KYG26090.1 | AZF04_14350 | AZF04_13475 | Sodium:proton exchanger; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.495 |