STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG25554.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0398 family. (184 aa)    
Predicted Functional Partners:
KYG34408.1
SprT family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SprT family.
  
     0.615
KYG25626.1
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.605
KYG25555.1
Cell division protein DivIVA; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation.
     
 0.563
KYG31837.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.546
KYG32872.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.517
KYG32174.1
DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.497
rnhA
An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.496
AZF04_03590
Preprotein translocase subunit SecD; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.487
KYG26947.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.464
KYG33721.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.452
Your Current Organism:
Bacillus trypoxylicola
NCBI taxonomy Id: 519424
Other names: B. trypoxylicola, Bacillus trypoxylicola Aizawa et al. 2010, KCTC 13244, NBRC 102646, strain SU1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.