Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Smon_0016PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU37390 antilisterial bacteriocin (subtilosin) production. (236 aa)    
Predicted Functional Partners:
Smon_0017
KEGG: wbr:WGLp157 hypothetical protein.
       0.773
lolD
ABC transporter related protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
 
    0.617
Smon_1397
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hpa:HPAG1_0365 multidrug resistance protein.
  
     0.572
Smon_0924
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bce:BC0210 oligopeptide transport ATP-binding protein OppF.
  
     0.519
rplM
Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
       0.511
rpsI
PFAM: ribosomal protein S9; KEGG: bha:BH0169 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
       0.501
Smon_0284
ABC transporter related protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
 
     0.501
Smon_1398
PFAM: ABC transporter related; SMC domain protein; SMART: AAA ATPase; KEGG: wbr:WGLp219 hypothetical protein.
  
     0.471
Smon_0068
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ott:OTT_1460 ABC transporter ATP-binding protein.
  
     0.422
Smon_1134
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: bcz:BCZK1718 multidrug ABC transporter, ATP- binding protein.
  
     0.410
Your Current Organism:
Streptobacillus moniliformis
NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112
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