Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Smon_0126PFAM: sulfatase; type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: pmr:PMI2124 exported sulfatase. (467 aa)    
Predicted Functional Partners:
Smon_0125
PFAM: polysaccharide lyase 8 alpha-helical; polysaccharide lyase family 8; KEGG: vfm:VFMJ11_A1113 hyaluronate lyase.
 
   
 0.830
Smon_0127
PFAM: glycosyl hydrolase family 88; KEGG: unsaturated glucuronyl hydrolase.
 
     0.801
Smon_1008
PFAM: Radical SAM domain protein; KEGG: sus:Acid_6646 radical SAM domain-containing protein.
 
  
 0.793
Smon_0124
PFAM: Heparinase II/III family protein; KEGG: bat:BAS5121 hypothetical protein.
       0.763
Smon_0128
Hypothetical protein.
       0.737
Smon_0123
PFAM: extracellular solute-binding protein family 1; KEGG: atc:AGR_L_3560 AlgQ1, putative multiple sugar transport system substrate-binding protein.
 
     0.704
Smon_0118
TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bcz:pE33L466_0344 2-deoxy-D-gluconate 3- dehydrogenase.
  
 
 0.611
Smon_0117
PFAM: polysaccharide lyase 8 alpha-helical; polysaccharide lyase family 8; KEGG: vfi:VF_A0994 hyaluronate lyase precursor.
 
     0.600
Smon_0122
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_3561 AlgM2, putative multiple sugar transport system permease protein.
       0.527
Smon_0121
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_3564 AlgM1, putative multiple sugar transport system permease protein.
       0.519
Your Current Organism:
Streptobacillus moniliformis
NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112
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