Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Smon_0219PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: bpy:Bphyt_3028 TPR repeat-containing protein. (189 aa)    
Predicted Functional Partners:
Smon_1129
TIGRFAM: conserved hypothetical protein; KEGG: bcr:BCAH187_A0963 putative ABC transporter, permease protein.
  
     0.745
Smon_1379
PFAM: Peptidase M23; KEGG: gbm:Gbem_1289 peptidase M23B.
 
 
   0.743
Smon_0958
PFAM: GCN5-related N-acetyltransferase; KEGG: wsu:WS0070 hypothetical protein.
 
     0.715
Smon_0916
KEGG: hypothetical protein.
 
     0.687
Smon_0550
Pseudouridylate synthase-like protein; KEGG: nis:NIS_1108 tRNA pseudouridine synthase A; Belongs to the tRNA pseudouridine synthase TruA family.
 
     0.662
Smon_1082
PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: gsu:GSU2268 outer membrane protein, putative.
  
   
 0.662
Smon_0640
PFAM: protein of unknown function DUF6 transmembrane; KEGG: mmw:Mmwyl1_0168 hypothetical protein.
 
     0.618
Smon_0995
PFAM: Endonuclease/exonuclease/phosphatase; SMART: Deoxyribonuclease I-like; KEGG: noc:Noc_A0008 endonuclease/exonuclease/phosphatase.
 
     0.591
Smon_0689
Hypothetical protein.
 
   
 0.545
frr
Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
       0.521
Your Current Organism:
Streptobacillus moniliformis
NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112
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