Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Smon_0271PFAM: PSP1 domain protein; KEGG: PSP1 domain protein. (171 aa)    
Predicted Functional Partners:
Smon_0272
KEGG: cjr:CJE0603 hypothetical protein; Belongs to the methyltransferase superfamily.
  
    0.833
engB
GTP-binding protein HSR1-related protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
       0.803
Smon_0270
TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: rbo:A1I_07095 DNA repair protein RadC; Belongs to the UPF0758 family.
       0.795
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
       0.786
Smon_0273
PFAM: Cupin 2 conserved barrel domain protein; KEGG: fph:Fphi_1279 hypothetical protein.
       0.773
Smon_0276
PFAM: LemA family protein; KEGG: dde:Dde_0577 hypothetical protein.
       0.756
Smon_0277
Hypothetical protein; KEGG: sme:SMc00852 putative transmembrane signal peptide protein.
       0.755
rny
RNA binding metal dependent phosphohydrolase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.
 
  
 0.679
fhs
PFAM: formate-tetrahydrofolate ligase FTHFS; KEGG: apa:APP7_0543 formyltetrahydrofolate synthetase; Belongs to the formate--tetrahydrofolate ligase family.
       0.524
Smon_0278
KEGG: viral A-type inclusion protein; K02331 DNA polymerase phi subunit.
       0.493
Your Current Organism:
Streptobacillus moniliformis
NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112
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