STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smon_0388PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: abc:ACICU_00989 heat shock protein. (242 aa)    
Predicted Functional Partners:
Smon_1051
Conserved hypothetical protein; KEGG: spl:Spea_1514 kelch repeat-containing protein.
  
     0.606
Smon_1172
Type IV secretory pathway protease TraF-like protein; KEGG: sbn:Sbal195_4714 conjugative transfer signal peptidase TraF.
  
     0.522
Smon_0389
KEGG: rhoptry protein.
       0.495
Smon_0386
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsh:Rsph17029_1062 binding-protein-dependent transport systems inner membrane component.
       0.489
Smon_0387
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcy:Bcer98_1009 ornithine carbamoyltransferase.
       0.489
potA-2
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
       0.478
Smon_0383
Carboxypeptidase Taq; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.
       0.444
Smon_0384
PFAM: peptidase M18 aminopeptidase I; KEGG: neu:NE1533 putative aminopeptidase 2.
       0.444
Your Current Organism:
Streptobacillus moniliformis
NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.