Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Smon_0460PFAM: Extracellular ligand-binding receptor; KEGG: mxa:MXAN_1151 receptor family ligand-binding protein. (375 aa)    
Predicted Functional Partners:
Smon_0462
PFAM: inner-membrane translocator; KEGG: mxa:MXAN_6663 putative branched chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.999
Smon_0461
PFAM: inner-membrane translocator; KEGG: bba:Bd3386 branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.998
Smon_0463
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bba:Bd3388 branched-chain amino acid transport system.
 
 
 0.998
Smon_0464
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gbm:Gbem_2185 ABC transporter related protein.
 
 
 0.997
Smon_0598
KEGG: dps:DP1983 glutamine ABC-transporter, permease protein (GlnP); TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: extracellular solute-binding protein family 3; binding-protein-dependent transport systems inner membrane component; SMART: extracellular solute-binding protein family 3.
  
 
 0.501
Smon_0459
Multidrug resistance efflux pump-like protein; KEGG: bca:BCE_0168 hypothetical protein.
     
 0.459
Smon_0465
Hypothetical protein.
       0.427
Your Current Organism:
Streptobacillus moniliformis
NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112
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