Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Smon_0626PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vsp:VS_2383 probable D-methionine transport system permease protein MetI. (214 aa)    
Predicted Functional Partners:
metN
ABC transporter related protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
 0.998
Smon_0627
PFAM: NLPA lipoprotein; KEGG: hhe:HH0713 hypothetical protein.
 0.998
Smon_0284
ABC transporter related protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
 
 0.988
Smon_0286
PFAM: NLPA lipoprotein; KEGG: bpe:BP0385 hypothetical protein.
 0.987
Smon_0285
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: set:SEN0493 ABC transporter integral membrane protein.
  
  
 
0.909
Smon_0628
TIGRFAM: sporulation integral membrane protein YtvI; PFAM: protein of unknown function UPF0118; KEGG: bha:BH0463 hypothetical protein.
       0.528
mltG
Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.
  
    0.441
Smon_0624
Hypothetical protein.
       0.436
queA
S-adenosylmethionine/tRNA-ribosyltransferase-iso merase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
  
    0.424
Smon_0630
TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation D domain protein; KEGG: ppd:Ppro_1802 SpoIID/LytB domain-containing protein.
       0.421
Your Current Organism:
Streptobacillus moniliformis
NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112
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