Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Smon_0658PFAM: restriction modification system DNA specificity domain; KEGG: dde:Dde_1860 type I restriction enzyme, S subunit. (473 aa)    
Predicted Functional Partners:
Smon_0657
PFAM: N-6 DNA methylase; KEGG: dde:Dde_1861 type I restriction-modification system specificity subunit.
 
 
 0.995
Smon_0659
PFAM: protein of unknown function DUF450; type III restriction protein res subunit; SMART: DEAD-like helicase; KEGG: dde:Dde_1859 DEAD/DEAH box helicase-like.
 
  
 0.988
Smon_0872
KEGG: Viral A-type inclusion protein repeat.
  
 
 0.922
Smon_0656
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; KEGG: bca:BCE_0370 hypothetical protein.
       0.789
Smon_0662
PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase; helicase domain protein; KEGG: sbn:Sbal195_1987 DEAD/DEAH box helicase domain-containing protein.
       0.753
Smon_0660
KEGG: lch:Lcho_1314 hypothetical protein.
       0.737
Smon_0661
KEGG: sbn:Sbal195_1986 hypothetical protein.
       0.714
Smon_1455
KEGG: prw:PsycPRwf_1121 hypothetical protein.
  
 
 0.669
Smon_0655
KEGG: hsm:HSM_1184 hypothetical protein.
       0.515
atpF-2
ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
   
 
 0.440
Your Current Organism:
Streptobacillus moniliformis
NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112
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