Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Smon_0677TIGRFAM: conserved hypothetical protein. (193 aa)    
Predicted Functional Partners:
Smon_0678
PFAM: cobalt transport protein; KEGG: hha:Hhal_0380 cobalt transport protein.
 
   
 0.955
Smon_0679
Sigma 54 interacting domain protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hha:Hhal_0379 ABC transporter related.
 
    0.955
Smon_0675
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dno:DNO_0444 ABC transporter.
 
     0.945
Smon_0676
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dno:DNO_0443 ABC transporter.
 
     0.943
Smon_0674
PFAM: regulatory protein TetR; KEGG: dno:DNO_0445 TetR family transcriptional regulator.
 
    0.934
Smon_0300
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cco:CCC13826_1933 pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
  
 0.623
Smon_0670
PFAM: GCN5-related N-acetyltransferase; KEGG: cps:CPS_4885 acetyltransferase.
  
    0.539
Smon_0438
PFAM: beta-lactamase domain protein; KEGG: bsu:BSU40370 hypothetical protein.
  
  
 0.518
Smon_0672
PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: esa:ESA_03308 ribonucleoside hydrolase RihC.
       0.504
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
     
 0.491
Your Current Organism:
Streptobacillus moniliformis
NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112
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