Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Smon_0719PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: pfl:PFL_6147 YeeE/YedE family protein. (183 aa)    
Predicted Functional Partners:
Smon_0717
PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: cko:CKO_01009 putative inner membrane protein.
     0.992
Smon_0718
PFAM: SirA family protein; KEGG: sgl:SG1742 hypothetical protein; Belongs to the sulfur carrier protein TusA family.
 
  
 0.954
Smon_0721
Hypothetical protein; Belongs to the sulfur carrier protein TusA family.
 
  
 0.926
Smon_0720
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: ppr:PBPRB1551 putative thioredoxin reductase.
 
     0.842
Smon_0722
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: cff:CFF8240_1434 LysR family transcriptional regulator.
 
     0.424
Smon_0716
DNA-(apurinic or apyrimidinic site) lyase; KEGG: rec:RHECIAT_PB0000014 putative N- glycosylase/DNA lyase protein, HhH-GPD family; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein.
       0.420
Your Current Organism:
Streptobacillus moniliformis
NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112
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