Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
Smon_0722Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: cff:CFF8240_1434 LysR family transcriptional regulator. (294 aa)    
Predicted Functional Partners:
Smon_0723
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcy:Bcer98_2013 ABC transporter-related protein.
     
 0.788
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.690
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.661
Smon_0484
Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
 
 0.641
Smon_0727
PFAM: protein of unknown function DUF45; KEGG: fph:Fphi_0127 hypothetical protein.
  
    0.543
Smon_0728
PFAM: band 7 protein; SMART: band 7 protein; KEGG: sat:SYN_00180 HflC protein.
  
    0.540
Smon_0724
PFAM: NUDIX hydrolase; KEGG: mmw:Mmwyl1_3558 NUDIX hydrolase.
     
 0.535
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
  
  
 0.531
Smon_0725
Magnesium transporter; Acts as a magnesium transporter.
       0.527
Smon_0726
Hypothetical protein.
       0.524
Your Current Organism:
Streptobacillus moniliformis
NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112
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