Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Smon_0728PFAM: band 7 protein; SMART: band 7 protein; KEGG: sat:SYN_00180 HflC protein. (276 aa)    
Predicted Functional Partners:
ftsH
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; In the central section; belongs to the AAA ATPase family.
  
 0.811
Smon_0729
Peptidyl-prolyl cis-trans isomerase cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
   0.787
Smon_0724
PFAM: NUDIX hydrolase; KEGG: mmw:Mmwyl1_3558 NUDIX hydrolase.
       0.762
Smon_0725
Magnesium transporter; Acts as a magnesium transporter.
     
 0.762
Smon_0726
Hypothetical protein.
       0.757
Smon_0727
PFAM: protein of unknown function DUF45; KEGG: fph:Fphi_0127 hypothetical protein.
       0.757
Smon_0723
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcy:Bcer98_2013 ABC transporter-related protein.
  
 
 0.581
Smon_0931
PFAM: peptidase M16 domain protein; KEGG: wpi:WPa_0591 peptidase, M16 family; Belongs to the peptidase M16 family.
  
 0.554
Smon_0722
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: cff:CFF8240_1434 LysR family transcriptional regulator.
  
    0.540
Smon_1215
TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; glucose-inhibited division protein A; biotin/lipoyl attachment domain-containing protein; KEGG: gdi:GDI1418 2-oxoglutarate dehydrogenase E3 component.
  
 0.523
Your Current Organism:
Streptobacillus moniliformis
NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112
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