STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smon_0882Hypothetical protein; KEGG: swi:Swit_3697 P-type conjugative transfer protein TrbL. (521 aa)    
Predicted Functional Partners:
Smon_0884
PFAM: CagE TrbE VirB component of type IV transporter system; SMART: AAA ATPase; KEGG: mes:Meso_2321 ATPas.
 
   
 0.945
Smon_0894
PFAM: TRAG family protein; KEGG: pap:PSPA7_3708 hypothetical protein.
 
   
 0.836
Smon_0895
PFAM: conjugation TrbI family protein; KEGG: rpc:RPC_3532 conjugation TrbI-like protein.
 
   
 0.833
Smon_0896
PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: sml:Smlt1284 putative conjugal transfer protein.
 
   
 0.831
Smon_0892
PFAM: type II secretion system protein E; KEGG: pna:Pnap_4195 type II secretion system protein E.
 
   
 0.829
Smon_0898
Type IV secretory pathway TrbF protein-like protein; KEGG: net:Neut_2549 conjugal transfer protein.
 
   
 0.825
Smon_1177
PFAM: CagE TrbE VirB component of type IV transporter system; KEGG: mes:Meso_2321 ATPas.
 
   
 0.797
Smon_1186
PFAM: conjugation TrbI family protein; KEGG: sbn:Sbal195_4698 conjugation TrbI family protein.
 
   
 0.796
Smon_1187
PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: sml:Smlt1284 putative conjugal transfer protein.
 
   
 0.795
Smon_1185
PFAM: TRAG family protein; KEGG: pap:PSPA7_3708 hypothetical protein.
 
   
 0.793
Your Current Organism:
Streptobacillus moniliformis
NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112
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