Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Smon_0923PFAM: O-methyltransferase family 3; KEGG: bcb:BCB4264_A4503 O-methyltransferase family protein. (209 aa)    
Predicted Functional Partners:
xseA
Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.
  
    0.813
uvrB
Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...]
     
 0.795
Smon_0920
Arsenate reductase-like protein; PFAM: arsenate reductase and related; KEGG: bsu:BSU32810 hypothetical protein; Belongs to the ArsC family.
       0.794
Smon_0922
PFAM: protein of unknown function DUF187; KEGG: bsu:BSU18280 hypothetical protein.
       0.785
Smon_0918
PFAM: CMP/dCMP deaminase zinc-binding; KEGG: dps:DP2271 deoxycytidylate deaminase.
       0.781
smc
SMC domain protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
    0.774
Smon_0916
KEGG: hypothetical protein.
       0.768
Smon_0925
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bca:BCE_0207 oligopeptide ABC transporter, ATP-binding protein.
  
    0.604
Smon_0926
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: prw:PsycPRwf_0023 binding-protein-dependent transport systems inner membrane component.
       0.599
Smon_0927
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_00702 ABC-type dipeptide/oligopeptide/nickel transport system, permease components.
       0.599
Your Current Organism:
Streptobacillus moniliformis
NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112
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