Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cmkTIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; KEGG: bsu:BSU22890 cytidylate kinase. (213 aa)    
Predicted Functional Partners:
der
Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
  
 0.976
Smon_0918
PFAM: CMP/dCMP deaminase zinc-binding; KEGG: dps:DP2271 deoxycytidylate deaminase.
    
  0.934
udk
TIGRFAM: uridine kinase; PFAM: phosphoribulokinase/uridine kinase; KEGG: similar to uridine-cytidine kinase 2.
   
 
 0.928
Smon_0541
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 
 0.927
Smon_0542
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.
    
 0.924
Smon_1429
PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; KEGG: pca:Pcar_1882 30S ribosomal protein S1.
 
  
 0.924
Smon_0759
Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
    
  0.914
Smon_0538
TIGRFAM: NAD pyrophosphatase/5'-nucleotidase NadN; PFAM: 5'-Nucleotidase domain protein; metallophosphoesterase; KEGG: hip:CGSHiEE_02210 NAD nucleotidase; Belongs to the 5'-nucleotidase family.
     
  0.900
Smon_0929
PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: bcc:BCc_214 RluC; Belongs to the pseudouridine synthase RluA family.
  
    0.821
Smon_0930
TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: rod shape-determining protein RodA; K05837 rod shape determining protein RodA; Belongs to the SEDS family.
  
    0.817
Your Current Organism:
Streptobacillus moniliformis
NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112
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