Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Smon_0963TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; peptidase S14 ClpP; KEGG: sus:Acid_7871 signal peptide peptidase SppA, 67K type. (547 aa)    
Predicted Functional Partners:
Smon_0964
PFAM: UvrD/REP helicase; KEGG: bcy:Bcer98_0285 ATP-dependent DNA helicase PcrA.
       0.749
Smon_0965
Hypothetical protein.
       0.749
Smon_0966
Hypothetical protein.
       0.749
Smon_0961
Hypothetical protein.
       0.565
Smon_0962
Hypothetical protein.
       0.565
Smon_0958
PFAM: GCN5-related N-acetyltransferase; KEGG: wsu:WS0070 hypothetical protein.
 
     0.490
Smon_1448
PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: hha:Hhal_0052 AMP-dependent synthetase and ligase.
 
  
 0.441
Your Current Organism:
Streptobacillus moniliformis
NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112
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