Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Smon_0972Transcriptional regulator, RpiR family; PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: hne:HNE_2458 RpiR family transcriptional regulator. (281 aa)    
Predicted Functional Partners:
murQ
Glucokinase regulatory-like protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
  
 0.874
Smon_0971
PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: bcb:BCB4264_A0877 PTS system, sucrose- specific IIBC component.
  
  
 0.873
Smon_0969
PFAM: protein of unknown function DUF871; KEGG: baa:BA_1411 hypothetical protein.
 
     0.712
Smon_0970
PFAM: putative esterase; KEGG: pmu:PM1451 XynC.
       0.709
Smon_1353
TIGRFAM: PTS system, beta-glucoside-specific IIABC subunit; PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: spe:Spro_2323 PTS system, beta-glucoside- specific IIABC subunit.
  
  
 0.635
Smon_0267
TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: vfm:VFMJ11_A0911 pts system glucose-specific eiicba component.
 
  
 0.618
Smon_0975
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pub:SAR11_1237 iron(III) ABC transporter.
       0.544
Smon_0976
PFAM: extracellular solute-binding protein family 1; KEGG: abu:Abu_2005 putative iron-uptake ABC transporter, periplasmic iron-binding protein.
       0.529
Smon_0974
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cff:CFF8240_1101 ABC transport system ATP- binding protein.
       0.522
Smon_0110
TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose- specific IIB subunit; phosphotransferase system EIIC; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: bcy:Bcer98_2394 PTS system, fructose subfamily, IIC subunit.
     
 0.469
Your Current Organism:
Streptobacillus moniliformis
NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112
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