Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Smon_0986Hypothetical protein; KEGG: hap:HAPS_0528 phosphoribosylformylglycinamidine synthase. (154 aa)    
Predicted Functional Partners:
Smon_0992
PFAM: transcriptional regulator TrmB; KEGG: ecr:ECIAI1_1939 conserved hypothetical protein; CymJ protein, transcriptional regulator domain.
 
     0.828
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
  
    0.820
Smon_0987
PFAM: Sel1 domain protein repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: bcy:Bcer98_1243 TPR repeat-containing protein.
  
    0.801
Smon_0990
tRNA/rRNA methyltransferase (SpoU); Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.
       0.797
Smon_0989
PFAM: dihydrofolate reductase region; KEGG: fth:FTH_0218 dihydrofolate reductase type I.
     
 0.791
Smon_0993
KEGG: pmr:PMI3501 deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; SMART: metal-dependent phosphohydrolase HD region.
       0.776
Smon_0991
PFAM: peptidase M50; KEGG: ppd:Ppro_2051 putative membrane-associated zinc metalloprotease.
       0.775
Smon_0995
PFAM: Endonuclease/exonuclease/phosphatase; SMART: Deoxyribonuclease I-like; KEGG: noc:Noc_A0008 endonuclease/exonuclease/phosphatase.
       0.761
Smon_0994
TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: vha:VIBHAR_05715 Na+-driven multidrug efflux pump.
       0.756
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
   
   0.751
Your Current Organism:
Streptobacillus moniliformis
NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112
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