Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Smon_1182 | Smon_1183 | PFAM: YadA domain protein; KEGG: pcr:Pcryo_1426 triple helix repeat-containing collagen. | PFAM: type II secretion system protein E; KEGG: sal:Sala_2485 type II secretion system protein E. | 0.749 |
Smon_1182 | Smon_1184 | PFAM: YadA domain protein; KEGG: pcr:Pcryo_1426 triple helix repeat-containing collagen. | KEGG: hypothetical protein. | 0.726 |
Smon_1182 | Smon_1185 | PFAM: YadA domain protein; KEGG: pcr:Pcryo_1426 triple helix repeat-containing collagen. | PFAM: TRAG family protein; KEGG: pap:PSPA7_3708 hypothetical protein. | 0.732 |
Smon_1182 | Smon_1186 | PFAM: YadA domain protein; KEGG: pcr:Pcryo_1426 triple helix repeat-containing collagen. | PFAM: conjugation TrbI family protein; KEGG: sbn:Sbal195_4698 conjugation TrbI family protein. | 0.807 |
Smon_1182 | Smon_1187 | PFAM: YadA domain protein; KEGG: pcr:Pcryo_1426 triple helix repeat-containing collagen. | PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: sml:Smlt1284 putative conjugal transfer protein. | 0.665 |
Smon_1182 | Smon_1188 | PFAM: YadA domain protein; KEGG: pcr:Pcryo_1426 triple helix repeat-containing collagen. | Hypothetical protein. | 0.538 |
Smon_1182 | Smon_1189 | PFAM: YadA domain protein; KEGG: pcr:Pcryo_1426 triple helix repeat-containing collagen. | Conserved hypothetical protein. | 0.508 |
Smon_1182 | Smon_1190 | PFAM: YadA domain protein; KEGG: pcr:Pcryo_1426 triple helix repeat-containing collagen. | Hypothetical protein; KEGG: net:Neut_2549 conjugal transfer protein. | 0.508 |
Smon_1182 | Smon_1191 | PFAM: YadA domain protein; KEGG: pcr:Pcryo_1426 triple helix repeat-containing collagen. | Hypothetical protein. | 0.508 |
Smon_1182 | Smon_1192 | PFAM: YadA domain protein; KEGG: pcr:Pcryo_1426 triple helix repeat-containing collagen. | Hypothetical protein. | 0.508 |
Smon_1183 | Smon_1182 | PFAM: type II secretion system protein E; KEGG: sal:Sala_2485 type II secretion system protein E. | PFAM: YadA domain protein; KEGG: pcr:Pcryo_1426 triple helix repeat-containing collagen. | 0.749 |
Smon_1183 | Smon_1184 | PFAM: type II secretion system protein E; KEGG: sal:Sala_2485 type II secretion system protein E. | KEGG: hypothetical protein. | 0.768 |
Smon_1183 | Smon_1185 | PFAM: type II secretion system protein E; KEGG: sal:Sala_2485 type II secretion system protein E. | PFAM: TRAG family protein; KEGG: pap:PSPA7_3708 hypothetical protein. | 0.950 |
Smon_1183 | Smon_1186 | PFAM: type II secretion system protein E; KEGG: sal:Sala_2485 type II secretion system protein E. | PFAM: conjugation TrbI family protein; KEGG: sbn:Sbal195_4698 conjugation TrbI family protein. | 0.943 |
Smon_1183 | Smon_1187 | PFAM: type II secretion system protein E; KEGG: sal:Sala_2485 type II secretion system protein E. | PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: sml:Smlt1284 putative conjugal transfer protein. | 0.937 |
Smon_1183 | Smon_1188 | PFAM: type II secretion system protein E; KEGG: sal:Sala_2485 type II secretion system protein E. | Hypothetical protein. | 0.566 |
Smon_1183 | Smon_1189 | PFAM: type II secretion system protein E; KEGG: sal:Sala_2485 type II secretion system protein E. | Conserved hypothetical protein. | 0.534 |
Smon_1183 | Smon_1190 | PFAM: type II secretion system protein E; KEGG: sal:Sala_2485 type II secretion system protein E. | Hypothetical protein; KEGG: net:Neut_2549 conjugal transfer protein. | 0.812 |
Smon_1183 | Smon_1191 | PFAM: type II secretion system protein E; KEGG: sal:Sala_2485 type II secretion system protein E. | Hypothetical protein. | 0.534 |
Smon_1183 | Smon_1192 | PFAM: type II secretion system protein E; KEGG: sal:Sala_2485 type II secretion system protein E. | Hypothetical protein. | 0.534 |
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