Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Smon_1198PFAM: replication initiator A domain protein; KEGG: bcb:BCB4264_A3622 replication protein, putative. (117 aa)    
Predicted Functional Partners:
Smon_1193
PFAM: MobA/MobL protein; KEGG: sbc:SbBS512_D0003 mobilization protein A.
 
    0.759
Smon_1199
Hypothetical protein.
       0.732
Smon_0900
PFAM: MobA/MobL protein; KEGG: sbc:SbBS512_D0003 mobilization protein A.
 
    0.665
Smon_1196
Prophage antirepressor; PFAM: BRO domain protein; KEGG: BRO family, N-terminal domain containing protein.
  
    0.647
Smon_1197
Hypothetical protein.
       0.620
Smon_0450
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bsu:BSU18850 hypothetical protein.
 
     0.594
Smon_0665
Relaxase; KEGG: bcz:pE33L54_0050 relaxase.
 
     0.574
Smon_1163
KEGG: baa:BXB0107 hypothetical protein.
 
  
 0.475
Smon_0663
Hypothetical protein; KEGG: hsm:HSM_1190 relaxase/mobilization nuclease family protein.
 
    0.465
Smon_0870
KEGG: baa:BXB0107 hypothetical protein.
 
  
 0.443
Your Current Organism:
Streptobacillus moniliformis
NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112
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