Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Smon_1205KEGG: atc:AGR_C_3374 ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (211 aa)    
Predicted Functional Partners:
Smon_1382
PFAM: Transketolase domain protein; KEGG: transketolase domain protein; K00615 transketolase.
  
 0.988
Smon_1147
PFAM: Transketolase domain protein; KEGG: set:SEN2323 putative transketolase N-terminal section.
  
 0.967
Smon_0559
KEGG: dds:Ddes_1446 ribose 5-phosphate isomerase B; TIGRFAM: ribose 5-phosphate isomerase B; sugar- phosphate isomerase, RpiB/LacA/LacB family; PFAM: Ribose/galactose isomerase.
  
 
 0.946
Smon_1146
PFAM: Transketolase domain protein; Transketolase central region; KEGG: stm:STM2340 putative transketolase.
 
 
 0.932
Smon_1381
PFAM: Transketolase central region; Transketolase domain protein; KEGG: pca:Pcar_2719 transketolase, C-terminal subunit.
 
 
 0.929
Smon_1319
TIGRFAM: L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein; KEGG: pmu:PM1244 L-ribulose-5-phosphate 4-epimerase.
  
 
 0.923
rsgA
Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
  
  
 0.892
Smon_0115
PFAM: PfkB domain protein; KEGG: bsu:BSU22110 2-keto-3-deoxygluconate kinase.
  
 0.869
Smon_0118
TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bcz:pE33L466_0344 2-deoxy-D-gluconate 3- dehydrogenase.
  
 
 0.826
Smon_1203
PFAM: PASTA domain containing protein; SMART: PASTA domain containing protein; KEGG: dol:Dole_2230 PASTA domain-containing protein.
  
    0.822
Your Current Organism:
Streptobacillus moniliformis
NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.