Smon_1264 protein (Streptobacillus moniliformis)

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Smon_1264

PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: bcy:Bcer98_2546 RNA-binding S4 domain- containing protein. (245 aa)

Predicted Functional Partners:

Smon_1207

0.801

rplX

0.746

rpmF

0.713

rplT

0.711

rplQ

0.710

rplU

0.710

rpmA

0.710

rpmG

0.710

rplS

0.710

rplC

0.697

Your Current Organism:

Streptobacillus moniliformis

NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Smon_1207	Smon_1264	Smon_1207	Smon_1264	PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: bcb:BCB4264_A3974 putative fibronectin- binding protein.	PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: bcy:Bcer98_2546 RNA-binding S4 domain- containing protein.	0.801
Smon_1207	rplC	Smon_1207	Smon_0192	PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: bcb:BCB4264_A3974 putative fibronectin- binding protein.	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.917
Smon_1207	rplS	Smon_1207	Smon_0913	PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: bcb:BCB4264_A3974 putative fibronectin- binding protein.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.621
Smon_1207	rplX	Smon_1207	Smon_1274	PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: bcb:BCB4264_A3974 putative fibronectin- binding protein.	Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.908
Smon_1264	Smon_1207	Smon_1264	Smon_1207	PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: bcy:Bcer98_2546 RNA-binding S4 domain- containing protein.	PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: bcb:BCB4264_A3974 putative fibronectin- binding protein.	0.801
Smon_1264	rplC	Smon_1264	Smon_0192	PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: bcy:Bcer98_2546 RNA-binding S4 domain- containing protein.	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.697
Smon_1264	rplQ	Smon_1264	Smon_0342	PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: bcy:Bcer98_2546 RNA-binding S4 domain- containing protein.	TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: rplQ; 50S ribosomal protein L17.	0.710
Smon_1264	rplS	Smon_1264	Smon_0913	PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: bcy:Bcer98_2546 RNA-binding S4 domain- containing protein.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.710
Smon_1264	rplT	Smon_1264	Smon_0492	PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: bcy:Bcer98_2546 RNA-binding S4 domain- containing protein.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.711
Smon_1264	rplU	Smon_1264	Smon_0497	PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: bcy:Bcer98_2546 RNA-binding S4 domain- containing protein.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.710
Smon_1264	rplX	Smon_1264	Smon_1274	PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: bcy:Bcer98_2546 RNA-binding S4 domain- containing protein.	Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.746
Smon_1264	rpmA	Smon_1264	Smon_0499	PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: bcy:Bcer98_2546 RNA-binding S4 domain- containing protein.	TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; KEGG: gbm:Gbem_0163 ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.710
Smon_1264	rpmF	Smon_1264	Smon_0633	PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: bcy:Bcer98_2546 RNA-binding S4 domain- containing protein.	TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: mno:Mnod_5920 ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.713
Smon_1264	rpmG	Smon_1264	Smon_0518	PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: bcy:Bcer98_2546 RNA-binding S4 domain- containing protein.	TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; KEGG: bcy:Bcer98_3067 50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.710
rplC	Smon_1207	Smon_0192	Smon_1207	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: bcb:BCB4264_A3974 putative fibronectin- binding protein.	0.917
rplC	Smon_1264	Smon_0192	Smon_1264	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: bcy:Bcer98_2546 RNA-binding S4 domain- containing protein.	0.697
rplC	rplQ	Smon_0192	Smon_0342	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: rplQ; 50S ribosomal protein L17.	0.994
rplC	rplS	Smon_0192	Smon_0913	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.976
rplC	rplT	Smon_0192	Smon_0492	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.985
rplC	rplU	Smon_0192	Smon_0497	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.990

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