Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Smon_1293Hypothetical protein. (216 aa)    
Predicted Functional Partners:
Smon_1290
TIGRFAM: hydroxymethylglutaryl-CoA reductase, degradative; KEGG: mxa:MXAN_5020 hydroxymethylglutaryl-CoA reductase; Belongs to the HMG-CoA reductase family.
       0.529
Smon_1291
KEGG: tcx:Tcr_1719 hydroxymethylglutaryl-coenzyme A synthase; TIGRFAM: hydroxymethylglutaryl-CoA synthase; PFAM: Hydroxymethylglutaryl-coenzyme A synthase domain protein; Hydroxymethylglutaryl-coenzyme A synthase domain.
       0.529
Smon_1292
KEGG: hit:NTHI0932 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.529
Smon_1289
PFAM: peptidase C1B bleomycin hydrolase; KEGG: BLMH; bleomycin hydrolase; K01372 bleomycin hydrolase; Belongs to the peptidase C1 family.
       0.505
Smon_1288
PFAM: aldo/keto reductase; KEGG: bcy:Bcer98_2796 2,5-didehydrogluconate reductase.
       0.499
Smon_1294
Hypothetical protein.
      
0.481
pgi
PFAM: phosphoglucose isomerase (PGI); KEGG: bsu:BSU31350 glucose-6-phosphate isomerase; Belongs to the GPI family.
       0.468
Your Current Organism:
Streptobacillus moniliformis
NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112
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