Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Smon_1304Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bsu:BSU33790 hypothetical protein. (91 aa)    
Predicted Functional Partners:
Smon_1303
PFAM: protein of unknown function DUF1648; KEGG: bca:BCE_4987 hypothetical protein.
 
    0.961
Smon_0300
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cco:CCC13826_1933 pyruvate:ferredoxin (flavodoxin) oxidoreductase.
     
 0.585
Smon_1308
Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; SMART: regulatory protein LacI; KEGG: sfr:Sfri_3504 transcriptional regulator, LacI family protein.
     
 0.558
Smon_1305
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: msu:MS0543 D-mannonate oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.555
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
       0.541
uxaC
PFAM: Glucuronate isomerase; KEGG: cko:CKO_03735 hypothetical protein.
       0.541
rnmV
Primase/topoisomerase like protein; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.
   
  
 0.502
Smon_0945
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: glo:Glov_1792 ferric uptake regulator, Fur family; Belongs to the Fur family.
  
  
 0.495
Smon_0920
Arsenate reductase-like protein; PFAM: arsenate reductase and related; KEGG: bsu:BSU32810 hypothetical protein; Belongs to the ArsC family.
     
 0.442
Smon_1448
PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: hha:Hhal_0052 AMP-dependent synthetase and ligase.
     
 0.442
Your Current Organism:
Streptobacillus moniliformis
NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112
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