Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Smon_1310Beta-glucuronidase; PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta- sandwich; KEGG: hsm:HSM_0285 beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. (588 aa)    
Predicted Functional Partners:
uxaC
PFAM: Glucuronate isomerase; KEGG: cko:CKO_03735 hypothetical protein.
 
  
 0.977
Smon_1309
Na+/melibiose symporter and related transporter- like protein; KEGG: mmw:Mmwyl1_1614 sugar (glycoside-pentoside- hexuronide) transporter.
 
 
 0.926
Smon_1311
Beta-N-acetylhexosaminidase; PFAM: glycoside hydrolase family 3 domain protein; KEGG: hsm:HSM_0411 glycoside hydrolase family 3 protein.
 
   
 0.903
Smon_1312
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: hso:HS_1599 hypothetical protein.
 
     0.811
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
     
 0.638
Smon_1305
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: msu:MS0543 D-mannonate oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   
 0.625
Smon_0300
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cco:CCC13826_1933 pyruvate:ferredoxin (flavodoxin) oxidoreductase.
     
 0.622
Smon_1308
Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; SMART: regulatory protein LacI; KEGG: sfr:Sfri_3504 transcriptional regulator, LacI family protein.
 
   
 0.622
Smon_1353
TIGRFAM: PTS system, beta-glucoside-specific IIABC subunit; PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: spe:Spro_2323 PTS system, beta-glucoside- specific IIABC subunit.
  
  
 0.590
Smon_1052
PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: eta:ETA_15810 aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.546
Your Current Organism:
Streptobacillus moniliformis
NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.