STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smon_1379PFAM: Peptidase M23; KEGG: gbm:Gbem_1289 peptidase M23B. (420 aa)    
Predicted Functional Partners:
Smon_1380
KEGG: bha:BH3601 cell-division protein.
 
 
 
 0.938
Smon_1381
PFAM: Transketolase central region; Transketolase domain protein; KEGG: pca:Pcar_2719 transketolase, C-terminal subunit.
       0.783
Smon_1382
PFAM: Transketolase domain protein; KEGG: transketolase domain protein; K00615 transketolase.
       0.782
Smon_1377
PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: pmu:PM0374 hypothetical protein.
       0.772
Smon_1383
PFAM: major facilitator superfamily MFS_1; KEGG: bsu:BSU17570 H+-symporter.
       0.761
Smon_1378
PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: bce:BC4919 phosphoglucomutase.
       0.742
Smon_0597
TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; KEGG: cco:CCC13826_0048 succinate dehydrogenase, iron-sulfur protein subunit.
  
     0.664
Smon_0219
PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: bpy:Bphyt_3028 TPR repeat-containing protein.
 
 
 
 0.653
Smon_1376
PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: hypothetical protein.
  
    0.556
Smon_1448
PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: hha:Hhal_0052 AMP-dependent synthetase and ligase.
 
   0.521
Your Current Organism:
Streptobacillus moniliformis
NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.