Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Smon_1390KEGG: hypothetical protein. (310 aa)    
Predicted Functional Partners:
tmcAL
Cytidyltransferase-related domain protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.
       0.773
Smon_1392
PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bha:BH1481 NADPH dehydrogenase NamA.
       0.773
Smon_0754
PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: abu:Abu_1113 hypothetical protein.
  
    0.694
Smon_0689
Hypothetical protein.
  
     0.680
Smon_1393
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: bcr:BCAH187_A4139 alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
 
     0.665
Smon_0825
PFAM: glycosyl transferase group 1; KEGG: maq:Maqu_3009 glycosyl transferase, group 1.
  
 
 0.647
Smon_1215
TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; glucose-inhibited division protein A; biotin/lipoyl attachment domain-containing protein; KEGG: gdi:GDI1418 2-oxoglutarate dehydrogenase E3 component.
  
 
  0.543
lon
ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
     
  0.522
Smon_1389
KEGG: ABC transporter family protein.
  
    0.521
Smon_0433
Hypothetical protein.
  
     0.517
Your Current Organism:
Streptobacillus moniliformis
NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112
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