Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
tmcALCytidyltransferase-related domain protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34. (378 aa)    
Predicted Functional Partners:
Smon_1392
PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bha:BH1481 NADPH dehydrogenase NamA.
       0.786
Smon_1390
KEGG: hypothetical protein.
       0.773
polC
DNA polymerase III, alpha subunit; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
  
     0.696
Smon_0590
PFAM: methyltransferase small; KEGG: bsu:BSU00340 hypothetical protein; Belongs to the methyltransferase superfamily.
 
     0.680
Smon_0712
PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: bha:BH1327 hypothetical protein.
 
    0.561
Smon_1393
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: bcr:BCAH187_A4139 alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
       0.552
Smon_1389
KEGG: ABC transporter family protein.
       0.509
Smon_0705
GTP-binding protein HSR1-related protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
 
     0.483
Smon_1264
PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: bcy:Bcer98_2546 RNA-binding S4 domain- containing protein.
  
     0.412
Your Current Organism:
Streptobacillus moniliformis
NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112
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