STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smon_1402KEGG: plu:plu2691 proline iminopeptidase (PIP); TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold; Belongs to the peptidase S33 family. (322 aa)    
Predicted Functional Partners:
Smon_1448
PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: hha:Hhal_0052 AMP-dependent synthetase and ligase.
  
 
 0.993
Smon_1405
Hypothetical protein.
  
    0.802
Smon_1403
PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: ftm:FTM_0928 protein of unknown function with predicted hydrolase and phosphorylase activity.
  
  
 0.792
uppP
Undecaprenol kinase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
     
 0.790
Smon_1401
TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; KEGG: ban:BA5646 HAD superfamily hydrolase.
  
  
 0.789
Smon_1404
Hypothetical protein.
       0.780
Smon_1406
Coproporphyrinogen dehydrogenase; KEGG: bcb:BCB4264_A0926 putative oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
       0.779
Smon_1400
PFAM: PTS system Galactitol-specific IIC component; KEGG: phosphotransferase system enzyme subunit; K02775 PTS system, galactitol-specific IIC component.
       0.748
Smon_0846
PFAM: Ankyrin; SMART: Ankyrin; KEGG: wpi:WPa_1379 ankyrin repeat domain protein.
  
 0.624
acpP
Phosphopantetheine-binding protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.620
Your Current Organism:
Streptobacillus moniliformis
NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112
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