Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Smon_1408PFAM: YadA domain protein; OmpA/MotB domain protein; Hep_Hag repeat-containing protein; Haemagluttinin domain protein; KEGG: hso:HS_1154 large adhesin. (2078 aa)    
Predicted Functional Partners:
Smon_0689
Hypothetical protein.
 
    0.723
Smon_0743
Shikimate 5-dehydrogenase-like protein; KEGG: pub:SAR11_0341 shikimate 5-dehydrogenase.
  
    0.608
Smon_0593
KEGG: sse:Ssed_0186 CheA signal transduction histidine kinase.
  
  
 0.576
Smon_1401
TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; KEGG: ban:BA5646 HAD superfamily hydrolase.
 
     0.572
Smon_1082
PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: gsu:GSU2268 outer membrane protein, putative.
  
     0.570
Smon_0754
PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: abu:Abu_1113 hypothetical protein.
  
     0.569
Smon_1402
KEGG: plu:plu2691 proline iminopeptidase (PIP); TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold; Belongs to the peptidase S33 family.
  
    0.526
Smon_1403
PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: ftm:FTM_0928 protein of unknown function with predicted hydrolase and phosphorylase activity.
       0.518
Smon_1404
Hypothetical protein.
       0.518
Smon_1405
Hypothetical protein.
       0.518
Your Current Organism:
Streptobacillus moniliformis
NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112
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