Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Smon_1451Putative helix-turn-helix protein YlxM/p13 family protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein. (108 aa)    
Predicted Functional Partners:
ffh
Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.
  
  
 0.953
whiA
Protein of unknown function DUF199; Involved in cell division and chromosome segregation.
  
  
 0.745
Smon_1449
PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: aba:Acid345_2858 AMP-dependent synthetase and ligase.
       0.662
Smon_1448
PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: hha:Hhal_0052 AMP-dependent synthetase and ligase.
       0.624
Smon_1264
PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: bcy:Bcer98_2546 RNA-binding S4 domain- containing protein.
  
     0.604
rpsP
TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; KEGG: gsu:GSU0643 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
  
    0.570
Smon_1452
Hypothetical protein.
       0.553
polC
DNA polymerase III, alpha subunit; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
 
     0.538
rnmV
Primase/topoisomerase like protein; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.
  
     0.494
Smon_1207
PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: bcb:BCB4264_A3974 putative fibronectin- binding protein.
  
     0.443
Your Current Organism:
Streptobacillus moniliformis
NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112
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