Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Smon_1455KEGG: prw:PsycPRwf_1121 hypothetical protein. (305 aa)    
Predicted Functional Partners:
Smon_1453
PFAM: Eco57I restriction endonuclease; KEGG: ajs:Ajs_0197 Eco57I restriction endonuclease.
     0.982
Smon_1454
PFAM: Eco57I restriction endonuclease; type III restriction protein res subunit; KEGG: dol:Dole_0904 site-specific DNA- methyltransferase (adenine-specific).
 
     0.943
Smon_0872
KEGG: Viral A-type inclusion protein repeat.
  
 
 0.682
Smon_0657
PFAM: N-6 DNA methylase; KEGG: dde:Dde_1861 type I restriction-modification system specificity subunit.
  
 
 0.680
Smon_0658
PFAM: restriction modification system DNA specificity domain; KEGG: dde:Dde_1860 type I restriction enzyme, S subunit.
  
 
 0.669
Smon_1211
PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: hap:HAPS_1616 neuraminidase/exo-alpha- sialidase NanH.
 
     0.414
Your Current Organism:
Streptobacillus moniliformis
NCBI taxonomy Id: 519441
Other names: S. moniliformis DSM 12112, Streptobacillus moniliformis ATCC 14647, Streptobacillus moniliformis DSM 12112, Streptobacillus moniliformis str. DSM 12112, Streptobacillus moniliformis strain DSM 12112
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