STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Huta_0200KEGG: hma:rrnAC1724 hypothetical protein. (70 aa)    
Predicted Functional Partners:
Huta_0201
PFAM: Na+/solute symporter; KEGG: hwa:HQ3326A sodium/pantothenate symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.820
Huta_0202
KEGG: hma:rrnAC1728 hypothetical protein.
       0.550
Huta_0195
TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold domain protein; PAS fold-4 domain protein; KEGG: pfo:Pfl01_3133 anti-sigma-factor antagonist (STAS).
       0.532
Huta_0196
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: met:M446_6566 anti-sigma-factor antagonist.
       0.532
Huta_0197
PFAM: ATP-binding region ATPase domain protein; KEGG: mta:Moth_1473 putative anti-sigma regulatory factor (serine/threonine protein kinase).
       0.532
Huta_0198
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: npu:Npun_R2264 putative anti-sigma regulatory factor, serine/threonine protein kinase.
       0.532
Huta_0199
KEGG: nph:NP1154A signal-transducing histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; PAC repeat-containing protein.
       0.532
dnaG
TOPRIM domain protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
       0.484
Your Current Organism:
Halorhabdus utahensis
NCBI taxonomy Id: 519442
Other names: H. utahensis DSM 12940, Halorhabdus utahensis AX-2, Halorhabdus utahensis DSM 12940, Halorhabdus utahensis str. DSM 12940, Halorhabdus utahensis strain DSM 12940
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