Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Huta_0677 | Huta_0678 | Huta_0677 | Huta_0678 | PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: rca:Rcas_2080 protein of unknown function DUF395 YeeE/YedE. | Hypothetical protein; KEGG: bad:BAD_1301 ActP copper transport ATPase. | 0.773 |
Huta_0677 | Huta_0679 | Huta_0677 | Huta_0679 | PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: rca:Rcas_2080 protein of unknown function DUF395 YeeE/YedE. | KEGG: hma:rrnAC0801 hypothetical protein. | 0.426 |
Huta_0678 | Huta_0677 | Huta_0678 | Huta_0677 | Hypothetical protein; KEGG: bad:BAD_1301 ActP copper transport ATPase. | PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: rca:Rcas_2080 protein of unknown function DUF395 YeeE/YedE. | 0.773 |
Huta_0678 | Huta_0679 | Huta_0678 | Huta_0679 | Hypothetical protein; KEGG: bad:BAD_1301 ActP copper transport ATPase. | KEGG: hma:rrnAC0801 hypothetical protein. | 0.426 |
Huta_0679 | Huta_0677 | Huta_0679 | Huta_0677 | KEGG: hma:rrnAC0801 hypothetical protein. | PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: rca:Rcas_2080 protein of unknown function DUF395 YeeE/YedE. | 0.426 |
Huta_0679 | Huta_0678 | Huta_0679 | Huta_0678 | KEGG: hma:rrnAC0801 hypothetical protein. | Hypothetical protein; KEGG: bad:BAD_1301 ActP copper transport ATPase. | 0.426 |
Huta_0679 | nucS | Huta_0679 | Huta_0168 | KEGG: hma:rrnAC0801 hypothetical protein. | Protein of unknown function DUF91; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | 0.475 |
Huta_0679 | psmB | Huta_0679 | Huta_2664 | KEGG: hma:rrnAC0801 hypothetical protein. | Proteasome endopeptidase complex; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | 0.495 |
nucS | Huta_0679 | Huta_0168 | Huta_0679 | Protein of unknown function DUF91; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | KEGG: hma:rrnAC0801 hypothetical protein. | 0.475 |
psmB | Huta_0679 | Huta_2664 | Huta_0679 | Proteasome endopeptidase complex; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | KEGG: hma:rrnAC0801 hypothetical protein. | 0.495 |