STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Huta_0888Multi-sensor signal transduction histidine kinase; KEGG: hma:rrnAC3361 HTR-like protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAC repeat-containing protein; GAF domain protein; PAS domain containing protein. (1045 aa)    
Predicted Functional Partners:
Huta_1567
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: mgi:Mflv_1887 two component transcriptional regulator.
 
 
 0.765
Huta_2186
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: nph:NP1154A signal-transducing histidine kinase.
  
 
   0.627
Huta_1773
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: nph:NP2906A response regulator.
  
     0.625
Huta_2885
PFAM: response regulator receiver; HalX domain protein; SMART: response regulator receiver; KEGG: hma:rrnAC1118 HoxA-like transcriptional regulator.
  
     0.624
Huta_0953
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: hma:rrnAC2194 chemotaxis protein CheY.
  
     0.590
Huta_0359
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: hma:rrnAC0536 HoxA-like transcriptional regulator.
  
     0.526
Huta_0887
PFAM: phosphoadenosine phosphosulfate reductase; KEGG: hma:rrnAC0653 phospho-adenylyl-sulfate reductase.
 
     0.523
Huta_2352
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: nph:NP2656A signal-transducing histidine kinase.
  
 
  
0.456
Huta_3020
Multi-sensor signal transduction histidine kinase; KEGG: hma:rrnAC0487 HTR-like protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold domain protein; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein.
  
 
  
0.452
Huta_2351
KEGG: nph:NP2656A signal-transducing histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; response regulator receiver; PAS fold domain protein; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAC repeat-containing protein; PAS domain containing protein.
 
 
  
0.441
Your Current Organism:
Halorhabdus utahensis
NCBI taxonomy Id: 519442
Other names: H. utahensis DSM 12940, Halorhabdus utahensis AX-2, Halorhabdus utahensis DSM 12940, Halorhabdus utahensis str. DSM 12940, Halorhabdus utahensis strain DSM 12940
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.